Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.76■□□□□ 0.11
Sh2d1aO88890 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sh2d1aO88890 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh2d1aO88890 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh2d1aO88890 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sh2d1aO88890 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d1aO88890 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d1aO88890 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d1aO88890 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d1aO88890 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d1aO88890 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Gm7432-201ENSMUST00000210343 879 ntBASIC15.73■□□□□ 0.11
Sh2d1aO88890 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d1aO88890 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Gm4799-201ENSMUST00000095396 657 ntBASIC15.72■□□□□ 0.11
Sh2d1aO88890 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sh2d1aO88890 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d1aO88890 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh2d1aO88890 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh2d1aO88890 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh2d1aO88890 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Sh2d1aO88890 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d1aO88890 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d1aO88890 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Gm11599-201ENSMUST00000118720 878 ntBASIC15.69■□□□□ 0.1
Sh2d1aO88890 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d1aO88890 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.68■□□□□ 0.1
Sh2d1aO88890 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.68■□□□□ 0.1
Sh2d1aO88890 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d1aO88890 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d1aO88890 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.67■□□□□ 0.1
Sh2d1aO88890 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d1aO88890 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d1aO88890 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d1aO88890 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Sh2d1aO88890 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d1aO88890 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh2d1aO88890 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d1aO88890 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d1aO88890 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh2d1aO88890 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms