Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdha4O88689 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdha4O88689 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Pcdha4O88689 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdha4O88689 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.27■■□□□ 1.64
Pcdha4O88689 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Pcdha4O88689 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcdha4O88689 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdha4O88689 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdha4O88689 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdha4O88689 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.26■■□□□ 1.63
Pcdha4O88689 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdha4O88689 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
Pcdha4O88689 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.25■■□□□ 1.63
Pcdha4O88689 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Pcdha4O88689 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Pcdha4O88689 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdha4O88689 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdha4O88689 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.23■■□□□ 1.63
Pcdha4O88689 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdha4O88689 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdha4O88689 Gm44428-201ENSMUST00000204474 874 ntBASIC25.23■■□□□ 1.63
Pcdha4O88689 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdha4O88689 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.23■■□□□ 1.63
Pcdha4O88689 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.22■■□□□ 1.63
Pcdha4O88689 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdha4O88689 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.22■■□□□ 1.63
Pcdha4O88689 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdha4O88689 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdha4O88689 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdha4O88689 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdha4O88689 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdha4O88689 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Pcdha4O88689 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdha4O88689 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.2■■□□□ 1.62
Pcdha4O88689 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdha4O88689 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdha4O88689 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.2■■□□□ 1.62
Pcdha4O88689 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdha4O88689 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdha4O88689 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdha4O88689 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.19■■□□□ 1.62
Pcdha4O88689 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Pcdha4O88689 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdha4O88689 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdha4O88689 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdha4O88689 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdha4O88689 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdha4O88689 Gm27502-201ENSMUST00000183495 199 ntBASIC25.17■■□□□ 1.62
Pcdha4O88689 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdha4O88689 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Pcdha4O88689 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdha4O88689 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdha4O88689 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdha4O88689 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Pcdha4O88689 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdha4O88689 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.15■■□□□ 1.62
Pcdha4O88689 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.15■■□□□ 1.62
Pcdha4O88689 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdha4O88689 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdha4O88689 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdha4O88689 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.14■■□□□ 1.62
Pcdha4O88689 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.14■■□□□ 1.62
Pcdha4O88689 Gm12366-201ENSMUST00000121722 873 ntBASIC25.14■■□□□ 1.62
Pcdha4O88689 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.14■■□□□ 1.62
Pcdha4O88689 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.14■■□□□ 1.62
Pcdha4O88689 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdha4O88689 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.14■■□□□ 1.62
Pcdha4O88689 Gm5786-201ENSMUST00000085368 882 ntBASIC25.14■■□□□ 1.62
Pcdha4O88689 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdha4O88689 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.13■■□□□ 1.61
Pcdha4O88689 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdha4O88689 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.13■■□□□ 1.61
Pcdha4O88689 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdha4O88689 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdha4O88689 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.12■■□□□ 1.61
Pcdha4O88689 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdha4O88689 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdha4O88689 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdha4O88689 Gm14523-201ENSMUST00000117260 558 ntBASIC25.11■■□□□ 1.61
Pcdha4O88689 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdha4O88689 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdha4O88689 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.1■■□□□ 1.61
Pcdha4O88689 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 Cap2-205ENSMUST00000225824 1634 ntBASIC25.1■■□□□ 1.61
Pcdha4O88689 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdha4O88689 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdha4O88689 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdha4O88689 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.08■■□□□ 1.61
Pcdha4O88689 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms