Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tulp3O88413 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tulp3O88413 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tulp3O88413 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.96■□□□□ 0.95
Tulp3O88413 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tulp3O88413 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Tulp3O88413 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tulp3O88413 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tulp3O88413 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tulp3O88413 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
Tulp3O88413 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tulp3O88413 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tulp3O88413 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Tulp3O88413 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tulp3O88413 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tulp3O88413 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Tulp3O88413 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tulp3O88413 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tulp3O88413 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tulp3O88413 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tulp3O88413 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tulp3O88413 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.91■□□□□ 0.94
Tulp3O88413 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tulp3O88413 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tulp3O88413 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tulp3O88413 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tulp3O88413 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tulp3O88413 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tulp3O88413 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tulp3O88413 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.89■□□□□ 0.93
Tulp3O88413 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tulp3O88413 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.89■□□□□ 0.93
Tulp3O88413 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.89■□□□□ 0.93
Tulp3O88413 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tulp3O88413 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tulp3O88413 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tulp3O88413 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tulp3O88413 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tulp3O88413 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.86■□□□□ 0.93
Tulp3O88413 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tulp3O88413 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.86■□□□□ 0.93
Tulp3O88413 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tulp3O88413 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tulp3O88413 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tulp3O88413 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tulp3O88413 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.86■□□□□ 0.93
Tulp3O88413 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tulp3O88413 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Tulp3O88413 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tulp3O88413 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.85■□□□□ 0.93
Tulp3O88413 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tulp3O88413 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.84■□□□□ 0.93
Tulp3O88413 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tulp3O88413 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tulp3O88413 Gm37136-201ENSMUST00000194368 194 ntBASIC20.84■□□□□ 0.93
Tulp3O88413 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tulp3O88413 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tulp3O88413 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tulp3O88413 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Tulp3O88413 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tulp3O88413 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tulp3O88413 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tulp3O88413 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tulp3O88413 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tulp3O88413 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tulp3O88413 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tulp3O88413 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tulp3O88413 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tulp3O88413 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tulp3O88413 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.8■□□□□ 0.92
Tulp3O88413 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tulp3O88413 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tulp3O88413 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tulp3O88413 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tulp3O88413 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Tulp3O88413 Nkain2-201ENSMUST00000092602 558 ntBASIC20.79■□□□□ 0.92
Tulp3O88413 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tulp3O88413 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tulp3O88413 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tulp3O88413 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms