Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm10226O88253 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm10226O88253 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm10226O88253 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm10226O88253 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm10226O88253 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm10226O88253 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
Gm10226O88253 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10226O88253 Gm7332-201ENSMUST00000118351 454 ntBASIC17.53■□□□□ 0.4
Gm10226O88253 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.53■□□□□ 0.4
Gm10226O88253 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Gm10226O88253 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10226O88253 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10226O88253 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10226O88253 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10226O88253 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm10226O88253 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.52■□□□□ 0.4
Gm10226O88253 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm10226O88253 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm10226O88253 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm10226O88253 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm10226O88253 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Gm10226O88253 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm10226O88253 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm10226O88253 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm10226O88253 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm10226O88253 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10226O88253 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm10226O88253 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Gm10226O88253 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm10226O88253 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm10226O88253 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm10226O88253 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm10226O88253 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm10226O88253 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm10226O88253 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gm10226O88253 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm10226O88253 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.47■□□□□ 0.39
Gm10226O88253 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm10226O88253 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm10226O88253 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm10226O88253 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm10226O88253 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gm10226O88253 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10226O88253 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.45■□□□□ 0.38
Gm10226O88253 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10226O88253 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10226O88253 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm10226O88253 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gm10226O88253 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm10226O88253 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gm10226O88253 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm10226O88253 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm10226O88253 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm10226O88253 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.41■□□□□ 0.38
Gm10226O88253 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gm10226O88253 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10226O88253 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm10226O88253 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.41■□□□□ 0.38
Gm10226O88253 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm10226O88253 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm10226O88253 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.4■□□□□ 0.38
Gm10226O88253 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm10226O88253 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm10226O88253 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm10226O88253 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm10226O88253 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10226O88253 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.38■□□□□ 0.37
Gm10226O88253 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.38■□□□□ 0.37
Gm10226O88253 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Gm10420-201ENSMUST00000121713 882 ntBASIC17.38■□□□□ 0.37
Gm10226O88253 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10226O88253 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms