Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptch2O35595 Gm5921-201ENSMUST00000075898 882 ntBASIC23.17■■□□□ 1.3
Ptch2O35595 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Ptch2O35595 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ptch2O35595 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch2O35595 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.15■■□□□ 1.3
Ptch2O35595 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch2O35595 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch2O35595 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ptch2O35595 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.15■■□□□ 1.3
Ptch2O35595 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch2O35595 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch2O35595 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ptch2O35595 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch2O35595 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.14■■□□□ 1.29
Ptch2O35595 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ptch2O35595 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch2O35595 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch2O35595 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.13■■□□□ 1.29
Ptch2O35595 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ptch2O35595 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch2O35595 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch2O35595 Gm5812-201ENSMUST00000061073 957 ntBASIC23.12■■□□□ 1.29
Ptch2O35595 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch2O35595 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch2O35595 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ptch2O35595 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch2O35595 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ptch2O35595 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch2O35595 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch2O35595 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch2O35595 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch2O35595 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ptch2O35595 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.08■■□□□ 1.29
Ptch2O35595 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch2O35595 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch2O35595 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch2O35595 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch2O35595 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.06■■□□□ 1.28
Ptch2O35595 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch2O35595 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.06■■□□□ 1.28
Ptch2O35595 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch2O35595 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch2O35595 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
Ptch2O35595 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ptch2O35595 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch2O35595 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch2O35595 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ptch2O35595 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.04■■□□□ 1.28
Ptch2O35595 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ptch2O35595 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch2O35595 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch2O35595 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch2O35595 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch2O35595 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch2O35595 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch2O35595 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Ptch2O35595 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch2O35595 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch2O35595 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch2O35595 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Ptch2O35595 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch2O35595 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptch2O35595 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ptch2O35595 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Ptch2O35595 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptch2O35595 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptch2O35595 Gm13238-201ENSMUST00000117655 780 ntBASIC23■■□□□ 1.27
Ptch2O35595 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch2O35595 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch2O35595 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.99■■□□□ 1.27
Ptch2O35595 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptch2O35595 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptch2O35595 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ptch2O35595 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.98■■□□□ 1.27
Ptch2O35595 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptch2O35595 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Ptch2O35595 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ptch2O35595 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptch2O35595 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.97■■□□□ 1.27
Ptch2O35595 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.96■■□□□ 1.27
Ptch2O35595 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch2O35595 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch2O35595 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ptch2O35595 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch2O35595 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ptch2O35595 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
Ptch2O35595 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ptch2O35595 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch2O35595 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ptch2O35595 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch2O35595 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch2O35595 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch2O35595 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ptch2O35595 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.94■■□□□ 1.26
Ptch2O35595 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.94■■□□□ 1.26
Ptch2O35595 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.94■■□□□ 1.26
Ptch2O35595 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch2O35595 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ptch2O35595 Gm15546-201ENSMUST00000122095 826 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms