Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx4O35137 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx4O35137 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx4O35137 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx4O35137 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx4O35137 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.09■□□□□ 0.81
Alx4O35137 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Alx4O35137 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Alx4O35137 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Alx4O35137 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Alx4O35137 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Alx4O35137 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.08■□□□□ 0.81
Alx4O35137 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Alx4O35137 Nkain2-201ENSMUST00000092602 558 ntBASIC20.08■□□□□ 0.81
Alx4O35137 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alx4O35137 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx4O35137 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx4O35137 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.07■□□□□ 0.8
Alx4O35137 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Alx4O35137 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx4O35137 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx4O35137 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx4O35137 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Alx4O35137 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.05■□□□□ 0.8
Alx4O35137 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Alx4O35137 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx4O35137 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx4O35137 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Alx4O35137 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Alx4O35137 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Alx4O35137 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx4O35137 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Alx4O35137 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.04■□□□□ 0.8
Alx4O35137 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx4O35137 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Alx4O35137 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx4O35137 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Alx4O35137 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Alx4O35137 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Alx4O35137 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Alx4O35137 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx4O35137 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx4O35137 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Alx4O35137 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Alx4O35137 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx4O35137 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Alx4O35137 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Alx4O35137 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx4O35137 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Alx4O35137 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Alx4O35137 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx4O35137 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx4O35137 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx4O35137 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.98■□□□□ 0.79
Alx4O35137 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx4O35137 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx4O35137 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx4O35137 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx4O35137 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.97■□□□□ 0.79
Alx4O35137 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx4O35137 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.96■□□□□ 0.79
Alx4O35137 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Alx4O35137 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx4O35137 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx4O35137 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.96■□□□□ 0.79
Alx4O35137 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx4O35137 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx4O35137 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Alx4O35137 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx4O35137 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx4O35137 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Alx4O35137 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx4O35137 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.94■□□□□ 0.78
Alx4O35137 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx4O35137 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx4O35137 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.93■□□□□ 0.78
Alx4O35137 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx4O35137 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx4O35137 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Alx4O35137 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.93■□□□□ 0.78
Alx4O35137 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx4O35137 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms