Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra3O35118 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra3O35118 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra3O35118 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra3O35118 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Gfra3O35118 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.45■□□□□ 0.7
Gfra3O35118 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra3O35118 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gfra3O35118 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.44■□□□□ 0.7
Gfra3O35118 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gfra3O35118 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gfra3O35118 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfra3O35118 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfra3O35118 Gm7332-201ENSMUST00000118351 454 ntBASIC19.44■□□□□ 0.7
Gfra3O35118 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Gfra3O35118 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfra3O35118 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
Gfra3O35118 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfra3O35118 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gfra3O35118 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gfra3O35118 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfra3O35118 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfra3O35118 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.42■□□□□ 0.7
Gfra3O35118 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra3O35118 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra3O35118 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra3O35118 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gfra3O35118 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfra3O35118 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfra3O35118 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gfra3O35118 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gfra3O35118 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Gfra3O35118 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gfra3O35118 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfra3O35118 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gfra3O35118 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfra3O35118 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.39■□□□□ 0.69
Gfra3O35118 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gfra3O35118 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gfra3O35118 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gfra3O35118 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gfra3O35118 Gm44428-201ENSMUST00000204474 874 ntBASIC19.38■□□□□ 0.69
Gfra3O35118 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.38■□□□□ 0.69
Gfra3O35118 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra3O35118 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra3O35118 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gfra3O35118 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.37■□□□□ 0.69
Gfra3O35118 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
Gfra3O35118 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Gfra3O35118 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra3O35118 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.36■□□□□ 0.69
Gfra3O35118 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra3O35118 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gfra3O35118 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gfra3O35118 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gfra3O35118 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Gfra3O35118 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gfra3O35118 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gfra3O35118 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gfra3O35118 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.34■□□□□ 0.69
Gfra3O35118 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.34■□□□□ 0.69
Gfra3O35118 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.34■□□□□ 0.69
Gfra3O35118 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gfra3O35118 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gfra3O35118 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gfra3O35118 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gfra3O35118 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Gfra3O35118 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.33■□□□□ 0.68
Gfra3O35118 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gfra3O35118 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gfra3O35118 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gfra3O35118 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfra3O35118 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gfra3O35118 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfra3O35118 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfra3O35118 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.32■□□□□ 0.68
Gfra3O35118 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra3O35118 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra3O35118 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.3■□□□□ 0.68
Gfra3O35118 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra3O35118 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra3O35118 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gfra3O35118 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra3O35118 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra3O35118 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gfra3O35118 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.29■□□□□ 0.68
Gfra3O35118 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.28■□□□□ 0.68
Gfra3O35118 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra3O35118 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms