Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnfrsf11bO08712 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.85■■□□□ 1.25
Tnfrsf11bO08712 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.85■■□□□ 1.25
Tnfrsf11bO08712 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.85■■□□□ 1.25
Tnfrsf11bO08712 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnfrsf11bO08712 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tnfrsf11bO08712 Gm4799-201ENSMUST00000095396 657 ntBASIC22.84■■□□□ 1.25
Tnfrsf11bO08712 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tnfrsf11bO08712 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tnfrsf11bO08712 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tnfrsf11bO08712 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Tnfrsf11bO08712 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Tnfrsf11bO08712 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tnfrsf11bO08712 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tnfrsf11bO08712 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tnfrsf11bO08712 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tnfrsf11bO08712 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.81■■□□□ 1.24
Tnfrsf11bO08712 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tnfrsf11bO08712 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.81■■□□□ 1.24
Tnfrsf11bO08712 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Tnfrsf11bO08712 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Tnfrsf11bO08712 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tnfrsf11bO08712 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Tnfrsf11bO08712 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf11bO08712 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf11bO08712 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf11bO08712 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf11bO08712 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf11bO08712 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Tnfrsf11bO08712 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Tnfrsf11bO08712 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Tnfrsf11bO08712 Gm7432-201ENSMUST00000210343 879 ntBASIC22.74■■□□□ 1.23
Tnfrsf11bO08712 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.74■■□□□ 1.23
Tnfrsf11bO08712 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Tnfrsf11bO08712 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tnfrsf11bO08712 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.73■■□□□ 1.23
Tnfrsf11bO08712 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Tnfrsf11bO08712 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tnfrsf11bO08712 Gm9812-201ENSMUST00000061934 968 ntBASIC22.72■■□□□ 1.23
Tnfrsf11bO08712 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Tnfrsf11bO08712 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tnfrsf11bO08712 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tnfrsf11bO08712 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Tnfrsf11bO08712 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Tnfrsf11bO08712 Mir3960-201ENSMUST00000198213 73 ntBASIC22.7■■□□□ 1.22
Tnfrsf11bO08712 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Tnfrsf11bO08712 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tnfrsf11bO08712 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Tnfrsf11bO08712 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tnfrsf11bO08712 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tnfrsf11bO08712 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.69■■□□□ 1.22
Tnfrsf11bO08712 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.69■■□□□ 1.22
Tnfrsf11bO08712 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Tnfrsf11bO08712 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tnfrsf11bO08712 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tnfrsf11bO08712 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tnfrsf11bO08712 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tnfrsf11bO08712 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.68■■□□□ 1.22
Tnfrsf11bO08712 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Gm11599-201ENSMUST00000118720 878 ntBASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnfrsf11bO08712 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Tnfrsf11bO08712 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.66■■□□□ 1.22
Tnfrsf11bO08712 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.66■■□□□ 1.22
Tnfrsf11bO08712 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.66■■□□□ 1.22
Tnfrsf11bO08712 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Tnfrsf11bO08712 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tnfrsf11bO08712 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Tnfrsf11bO08712 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.65■■□□□ 1.22
Tnfrsf11bO08712 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tnfrsf11bO08712 Gm45364-201ENSMUST00000210883 159 ntBASIC22.64■■□□□ 1.21
Tnfrsf11bO08712 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tnfrsf11bO08712 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tnfrsf11bO08712 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms