Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3139J3QK78 Gm14523-201ENSMUST00000117260 558 ntBASIC22.59■■□□□ 1.21
Gm3139J3QK78 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.59■■□□□ 1.21
Gm3139J3QK78 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Gm3139J3QK78 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm3139J3QK78 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.58■■□□□ 1.21
Gm3139J3QK78 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm3139J3QK78 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm3139J3QK78 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Gm3139J3QK78 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3139J3QK78 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.57■■□□□ 1.2
Gm3139J3QK78 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3139J3QK78 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3139J3QK78 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.56■■□□□ 1.2
Gm3139J3QK78 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.56■■□□□ 1.2
Gm3139J3QK78 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Gm3139J3QK78 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
Gm3139J3QK78 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.55■■□□□ 1.2
Gm3139J3QK78 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3139J3QK78 Gm7332-201ENSMUST00000118351 454 ntBASIC22.54■■□□□ 1.2
Gm3139J3QK78 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3139J3QK78 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3139J3QK78 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.54■■□□□ 1.2
Gm3139J3QK78 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.52■■□□□ 1.2
Gm3139J3QK78 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm3139J3QK78 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.52■■□□□ 1.2
Gm3139J3QK78 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.51■■□□□ 1.19
Gm3139J3QK78 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Gm3139J3QK78 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm3139J3QK78 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm3139J3QK78 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm3139J3QK78 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm3139J3QK78 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Gm3139J3QK78 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3139J3QK78 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3139J3QK78 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.49■■□□□ 1.19
Gm3139J3QK78 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3139J3QK78 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3139J3QK78 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3139J3QK78 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
Gm3139J3QK78 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm3139J3QK78 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.48■■□□□ 1.19
Gm3139J3QK78 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3139J3QK78 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Gm3139J3QK78 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3139J3QK78 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.46■■□□□ 1.19
Gm3139J3QK78 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Gm3139J3QK78 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3139J3QK78 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.46■■□□□ 1.19
Gm3139J3QK78 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3139J3QK78 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Gm3139J3QK78 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3139J3QK78 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.44■■□□□ 1.18
Gm3139J3QK78 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.44■■□□□ 1.18
Gm3139J3QK78 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3139J3QK78 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Gm3139J3QK78 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3139J3QK78 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3139J3QK78 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3139J3QK78 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3139J3QK78 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Gm3139J3QK78 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3139J3QK78 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3139J3QK78 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3139J3QK78 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3139J3QK78 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3139J3QK78 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.4■■□□□ 1.18
Gm3139J3QK78 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3139J3QK78 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.39■■□□□ 1.18
Gm3139J3QK78 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.39■■□□□ 1.18
Gm3139J3QK78 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3139J3QK78 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3139J3QK78 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3139J3QK78 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Gm3139J3QK78 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3139J3QK78 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3139J3QK78 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.38■■□□□ 1.17
Gm3139J3QK78 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3139J3QK78 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3139J3QK78 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.37■■□□□ 1.17
Gm3139J3QK78 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Gm3139J3QK78 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3139J3QK78 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3139J3QK78 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3139J3QK78 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms