Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
9930021J03RikH3BKP8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
9930021J03RikH3BKP8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
9930021J03RikH3BKP8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
9930021J03RikH3BKP8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
9930021J03RikH3BKP8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.06■□□□□ 0.96
9930021J03RikH3BKP8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
9930021J03RikH3BKP8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
9930021J03RikH3BKP8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
9930021J03RikH3BKP8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.05■□□□□ 0.96
9930021J03RikH3BKP8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Gm12366-201ENSMUST00000121722 873 ntBASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Gm5786-201ENSMUST00000085368 882 ntBASIC21.04■□□□□ 0.96
9930021J03RikH3BKP8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.03■□□□□ 0.96
9930021J03RikH3BKP8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
9930021J03RikH3BKP8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
9930021J03RikH3BKP8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.02■□□□□ 0.95
9930021J03RikH3BKP8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
9930021J03RikH3BKP8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
9930021J03RikH3BKP8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
9930021J03RikH3BKP8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21■□□□□ 0.95
9930021J03RikH3BKP8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
9930021J03RikH3BKP8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
9930021J03RikH3BKP8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
9930021J03RikH3BKP8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21■□□□□ 0.95
9930021J03RikH3BKP8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
9930021J03RikH3BKP8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
9930021J03RikH3BKP8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
9930021J03RikH3BKP8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
9930021J03RikH3BKP8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.98■□□□□ 0.95
9930021J03RikH3BKP8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.97■□□□□ 0.95
9930021J03RikH3BKP8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.97■□□□□ 0.95
9930021J03RikH3BKP8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
9930021J03RikH3BKP8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
9930021J03RikH3BKP8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
9930021J03RikH3BKP8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
9930021J03RikH3BKP8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
9930021J03RikH3BKP8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
9930021J03RikH3BKP8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
9930021J03RikH3BKP8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
9930021J03RikH3BKP8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
9930021J03RikH3BKP8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
9930021J03RikH3BKP8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.93■□□□□ 0.94
9930021J03RikH3BKP8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
9930021J03RikH3BKP8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
9930021J03RikH3BKP8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
9930021J03RikH3BKP8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.92■□□□□ 0.94
9930021J03RikH3BKP8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
9930021J03RikH3BKP8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
9930021J03RikH3BKP8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.92■□□□□ 0.94
9930021J03RikH3BKP8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
9930021J03RikH3BKP8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
9930021J03RikH3BKP8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
9930021J03RikH3BKP8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
9930021J03RikH3BKP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
9930021J03RikH3BKP8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.9■□□□□ 0.94
9930021J03RikH3BKP8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.9■□□□□ 0.94
9930021J03RikH3BKP8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
9930021J03RikH3BKP8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
9930021J03RikH3BKP8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms