Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Hfm1D3Z4R1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Hfm1D3Z4R1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
Hfm1D3Z4R1 Gm9959-201ENSMUST00000068277 390 ntBASIC32.79■■■□□ 2.84
Hfm1D3Z4R1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
Hfm1D3Z4R1 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.78■■■□□ 2.84
Hfm1D3Z4R1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Hfm1D3Z4R1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Hfm1D3Z4R1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Hfm1D3Z4R1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
Hfm1D3Z4R1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Hfm1D3Z4R1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Hfm1D3Z4R1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Hfm1D3Z4R1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Gm18755-201ENSMUST00000218030 1099 ntBASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC32.72■■■□□ 2.83
Hfm1D3Z4R1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hfm1D3Z4R1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 AC117769.4-201ENSMUST00000225679 685 ntBASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hfm1D3Z4R1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Hfm1D3Z4R1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hfm1D3Z4R1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hfm1D3Z4R1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hfm1D3Z4R1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hfm1D3Z4R1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.66■■■□□ 2.82
Hfm1D3Z4R1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.65■■■□□ 2.82
Hfm1D3Z4R1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Hfm1D3Z4R1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hfm1D3Z4R1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.6■■■□□ 2.81
Hfm1D3Z4R1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC32.59■■■□□ 2.81
Hfm1D3Z4R1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hfm1D3Z4R1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hfm1D3Z4R1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Hfm1D3Z4R1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.57■■■□□ 2.8
Hfm1D3Z4R1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Hfm1D3Z4R1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
Hfm1D3Z4R1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hfm1D3Z4R1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC32.54■■■□□ 2.8
Hfm1D3Z4R1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Hfm1D3Z4R1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hfm1D3Z4R1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hfm1D3Z4R1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Hfm1D3Z4R1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.51■■■□□ 2.8
Hfm1D3Z4R1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hfm1D3Z4R1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hfm1D3Z4R1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Hfm1D3Z4R1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
Hfm1D3Z4R1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Hfm1D3Z4R1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms