Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12-1A0N8R1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12-1A0N8R1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12-1A0N8R1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav12-1A0N8R1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trav12-1A0N8R1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trav12-1A0N8R1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12-1A0N8R1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12-1A0N8R1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12-1A0N8R1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12-1A0N8R1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav12-1A0N8R1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12-1A0N8R1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12-1A0N8R1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12-1A0N8R1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12-1A0N8R1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12-1A0N8R1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trav12-1A0N8R1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav12-1A0N8R1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav12-1A0N8R1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav12-1A0N8R1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12-1A0N8R1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12-1A0N8R1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12-1A0N8R1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12-1A0N8R1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12-1A0N8R1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trav12-1A0N8R1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav12-1A0N8R1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms