Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv6-25A0A140T8N7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv6-25A0A140T8N7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv6-25A0A140T8N7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv6-25A0A140T8N7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv6-25A0A140T8N7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv6-25A0A140T8N7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv6-25A0A140T8N7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Igkv6-25A0A140T8N7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv6-25A0A140T8N7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv6-25A0A140T8N7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv6-25A0A140T8N7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv6-25A0A140T8N7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv6-25A0A140T8N7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv6-25A0A140T8N7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv6-25A0A140T8N7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Igkv6-25A0A140T8N7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv6-25A0A140T8N7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv6-25A0A140T8N7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.32■■□□□ 1
Igkv6-25A0A140T8N7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv6-25A0A140T8N7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.32■■□□□ 1
Igkv6-25A0A140T8N7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Igkv6-25A0A140T8N7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv6-25A0A140T8N7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.31■■□□□ 1
Igkv6-25A0A140T8N7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.31■■□□□ 1
Igkv6-25A0A140T8N7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv6-25A0A140T8N7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv6-25A0A140T8N7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv6-25A0A140T8N7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Gm5812-201ENSMUST00000061073 957 ntBASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv6-25A0A140T8N7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.27■□□□□ 0.99
Igkv6-25A0A140T8N7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv6-25A0A140T8N7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Igkv6-25A0A140T8N7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv6-25A0A140T8N7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv6-25A0A140T8N7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.26■□□□□ 0.99
Igkv6-25A0A140T8N7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv6-25A0A140T8N7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv6-25A0A140T8N7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv6-25A0A140T8N7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv6-25A0A140T8N7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.25■□□□□ 0.99
Igkv6-25A0A140T8N7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv6-25A0A140T8N7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Igkv6-25A0A140T8N7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv6-25A0A140T8N7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.23■□□□□ 0.99
Igkv6-25A0A140T8N7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.23■□□□□ 0.99
Igkv6-25A0A140T8N7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.23■□□□□ 0.99
Igkv6-25A0A140T8N7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv6-25A0A140T8N7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv6-25A0A140T8N7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Igkv6-25A0A140T8N7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.2■□□□□ 0.98
Igkv6-25A0A140T8N7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv6-25A0A140T8N7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv6-25A0A140T8N7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Igkv6-25A0A140T8N7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv6-25A0A140T8N7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.18■□□□□ 0.98
Igkv6-25A0A140T8N7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv6-25A0A140T8N7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv6-25A0A140T8N7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms