Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-42A0A0A6YY38 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-42A0A0A6YY38 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.05■□□□□ 0.96
Ighv1-42A0A0A6YY38 Gm5921-201ENSMUST00000075898 882 ntBASIC21.05■□□□□ 0.96
Ighv1-42A0A0A6YY38 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ighv1-42A0A0A6YY38 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-42A0A0A6YY38 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-42A0A0A6YY38 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-42A0A0A6YY38 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-42A0A0A6YY38 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.02■□□□□ 0.96
Ighv1-42A0A0A6YY38 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ighv1-42A0A0A6YY38 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-42A0A0A6YY38 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ighv1-42A0A0A6YY38 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-42A0A0A6YY38 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-42A0A0A6YY38 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-42A0A0A6YY38 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-42A0A0A6YY38 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-42A0A0A6YY38 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21■□□□□ 0.95
Ighv1-42A0A0A6YY38 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-42A0A0A6YY38 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-42A0A0A6YY38 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-42A0A0A6YY38 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-42A0A0A6YY38 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-42A0A0A6YY38 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-42A0A0A6YY38 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-42A0A0A6YY38 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ighv1-42A0A0A6YY38 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-42A0A0A6YY38 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-42A0A0A6YY38 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.97■□□□□ 0.95
Ighv1-42A0A0A6YY38 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-42A0A0A6YY38 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-42A0A0A6YY38 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-42A0A0A6YY38 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-42A0A0A6YY38 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-42A0A0A6YY38 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ighv1-42A0A0A6YY38 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.95■□□□□ 0.94
Ighv1-42A0A0A6YY38 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-42A0A0A6YY38 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-42A0A0A6YY38 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-42A0A0A6YY38 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.93■□□□□ 0.94
Ighv1-42A0A0A6YY38 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ighv1-42A0A0A6YY38 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-42A0A0A6YY38 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-42A0A0A6YY38 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-42A0A0A6YY38 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-42A0A0A6YY38 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-42A0A0A6YY38 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ighv1-42A0A0A6YY38 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-42A0A0A6YY38 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-42A0A0A6YY38 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-42A0A0A6YY38 Gm5812-201ENSMUST00000061073 957 ntBASIC20.9■□□□□ 0.94
Ighv1-42A0A0A6YY38 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Ighv1-42A0A0A6YY38 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-42A0A0A6YY38 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-42A0A0A6YY38 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-42A0A0A6YY38 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ighv1-42A0A0A6YY38 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-42A0A0A6YY38 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-42A0A0A6YY38 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-42A0A0A6YY38 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.87■□□□□ 0.93
Ighv1-42A0A0A6YY38 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-42A0A0A6YY38 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-42A0A0A6YY38 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
Ighv1-42A0A0A6YY38 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.86■□□□□ 0.93
Ighv1-42A0A0A6YY38 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-42A0A0A6YY38 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.86■□□□□ 0.93
Ighv1-42A0A0A6YY38 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-42A0A0A6YY38 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.85■□□□□ 0.93
Ighv1-42A0A0A6YY38 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-42A0A0A6YY38 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-42A0A0A6YY38 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-42A0A0A6YY38 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.83■□□□□ 0.93
Ighv1-42A0A0A6YY38 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv1-42A0A0A6YY38 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.82■□□□□ 0.92
Ighv1-42A0A0A6YY38 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-42A0A0A6YY38 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms