Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.69■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-23A0A0A6YVW3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Nkain2-201ENSMUST00000092602 558 ntBASIC16.63■□□□□ 0.25
Ighv1-23A0A0A6YVW3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-23A0A0A6YVW3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-23A0A0A6YVW3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-23A0A0A6YVW3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-23A0A0A6YVW3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-23A0A0A6YVW3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms