Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-5A0A075B6B5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav6-5A0A075B6B5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-5A0A075B6B5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-5A0A075B6B5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav6-5A0A075B6B5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-5A0A075B6B5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6-5A0A075B6B5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-5A0A075B6B5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-5A0A075B6B5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-5A0A075B6B5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-5A0A075B6B5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav6-5A0A075B6B5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Gm30023-201ENSMUST00000197970 889 ntBASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-5A0A075B6B5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-5A0A075B6B5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-5A0A075B6B5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-5A0A075B6B5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-5A0A075B6B5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-5A0A075B6B5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trav6-5A0A075B6B5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav6-5A0A075B6B5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-5A0A075B6B5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-5A0A075B6B5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-5A0A075B6B5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav6-5A0A075B6B5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav6-5A0A075B6B5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-5A0A075B6B5 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.37■□□□□ 0.37
Trav6-5A0A075B6B5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav6-5A0A075B6B5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-5A0A075B6B5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-5A0A075B6B5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 Gm8109-201ENSMUST00000194076 746 ntBASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-5A0A075B6B5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-5A0A075B6B5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-5A0A075B6B5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-5A0A075B6B5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-5A0A075B6B5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-5A0A075B6B5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms