Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-3A0A075B6A4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-3A0A075B6A4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav12d-3A0A075B6A4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12d-3A0A075B6A4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-3A0A075B6A4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-3A0A075B6A4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav12d-3A0A075B6A4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12d-3A0A075B6A4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Trav12d-3A0A075B6A4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Gm27322-201ENSMUST00000184007 104 ntBASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav12d-3A0A075B6A4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav12d-3A0A075B6A4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav12d-3A0A075B6A4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-3A0A075B6A4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-3A0A075B6A4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-3A0A075B6A4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-3A0A075B6A4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav12d-3A0A075B6A4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-3A0A075B6A4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-3A0A075B6A4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-3A0A075B6A4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-3A0A075B6A4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12d-3A0A075B6A4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav12d-3A0A075B6A4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12d-3A0A075B6A4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12d-3A0A075B6A4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12d-3A0A075B6A4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav12d-3A0A075B6A4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12d-3A0A075B6A4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12d-3A0A075B6A4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12d-3A0A075B6A4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12d-3A0A075B6A4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12d-3A0A075B6A4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav12d-3A0A075B6A4 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.8■□□□□ 0.28
Trav12d-3A0A075B6A4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav12d-3A0A075B6A4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12d-3A0A075B6A4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12d-3A0A075B6A4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav12d-3A0A075B6A4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12d-3A0A075B6A4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12d-3A0A075B6A4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12d-3A0A075B6A4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12d-3A0A075B6A4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav12d-3A0A075B6A4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav12d-3A0A075B6A4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav12d-3A0A075B6A4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav12d-3A0A075B6A4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trav12d-3A0A075B6A4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.77■□□□□ 0.27
Trav12d-3A0A075B6A4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms