Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nkain2-201ENSMUST00000092602 558 ntBASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav4-4-dv10A0A075B651 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms