Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav5-1A0A075B5Z7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav5-1A0A075B5Z7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav5-1A0A075B5Z7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav5-1A0A075B5Z7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5-1A0A075B5Z7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5-1A0A075B5Z7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav5-1A0A075B5Z7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.42■□□□□ 0.7
Trav5-1A0A075B5Z7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5-1A0A075B5Z7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav5-1A0A075B5Z7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav5-1A0A075B5Z7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav5-1A0A075B5Z7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav5-1A0A075B5Z7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav5-1A0A075B5Z7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Trav5-1A0A075B5Z7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav5-1A0A075B5Z7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav5-1A0A075B5Z7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav5-1A0A075B5Z7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trav5-1A0A075B5Z7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5-1A0A075B5Z7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.37■□□□□ 0.69
Trav5-1A0A075B5Z7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5-1A0A075B5Z7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.36■□□□□ 0.69
Trav5-1A0A075B5Z7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav5-1A0A075B5Z7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav5-1A0A075B5Z7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav5-1A0A075B5Z7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trav5-1A0A075B5Z7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav5-1A0A075B5Z7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav5-1A0A075B5Z7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Trav5-1A0A075B5Z7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav5-1A0A075B5Z7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav5-1A0A075B5Z7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav5-1A0A075B5Z7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav5-1A0A075B5Z7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.31■□□□□ 0.68
Trav5-1A0A075B5Z7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav5-1A0A075B5Z7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.3■□□□□ 0.68
Trav5-1A0A075B5Z7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5-1A0A075B5Z7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav5-1A0A075B5Z7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trav5-1A0A075B5Z7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trav5-1A0A075B5Z7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav5-1A0A075B5Z7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav5-1A0A075B5Z7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav5-1A0A075B5Z7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5-1A0A075B5Z7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.26■□□□□ 0.67
Trav5-1A0A075B5Z7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.26■□□□□ 0.67
Trav5-1A0A075B5Z7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav5-1A0A075B5Z7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav5-1A0A075B5Z7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.24■□□□□ 0.67
Trav5-1A0A075B5Z7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms