Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.22■□□□□ 0.03
H2afb2S4R1M3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm5682-201ENSMUST00000173402 505 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afb2S4R1M3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afb2S4R1M3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afb2S4R1M3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms