Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Gm9727-201ENSMUST00000161387 555 ntBASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phf1Q9Z1B8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phf1Q9Z1B8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Phf1Q9Z1B8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms