Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm13616-201ENSMUST00000120600 222 ntBASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h3Q9Z0Y9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h3Q9Z0Y9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm11745-201ENSMUST00000121669 448 ntBASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h3Q9Z0Y9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms