Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Gm43767-201ENSMUST00000198933 381 ntBASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcb1Q9Z0H3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcb1Q9Z0H3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcb1Q9Z0H3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcb1Q9Z0H3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.71■□□□□ 0.1
Smarcb1Q9Z0H3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcb1Q9Z0H3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Gm43125-201ENSMUST00000201724 730 ntBASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcb1Q9Z0H3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms