Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Gm5587-201ENSMUST00000206270 674 ntBASIC11.86□□□□□ -0.51
CcsQ9WU84 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.86□□□□□ -0.51
CcsQ9WU84 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.86□□□□□ -0.51
CcsQ9WU84 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CcsQ9WU84 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CcsQ9WU84 Actl10-202ENSMUST00000226583 1501 ntBASIC11.86□□□□□ -0.51
CcsQ9WU84 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Efs-202ENSMUST00000227037 2540 ntBASIC11.85□□□□□ -0.51
CcsQ9WU84 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gm11355-201ENSMUST00000121120 306 ntBASIC11.85□□□□□ -0.51
CcsQ9WU84 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CcsQ9WU84 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.85□□□□□ -0.51
CcsQ9WU84 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.85□□□□□ -0.51
CcsQ9WU84 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CcsQ9WU84 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.84□□□□□ -0.51
CcsQ9WU84 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.84□□□□□ -0.51
CcsQ9WU84 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.84□□□□□ -0.51
CcsQ9WU84 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Gm33142-201ENSMUST00000193913 867 ntBASIC11.84□□□□□ -0.51
CcsQ9WU84 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms