Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Col13a1Q9R1N9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm12151-201ENSMUST00000121374 290 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm9682-201ENSMUST00000197505 556 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm20553-201ENSMUST00000204205 844 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col13a1Q9R1N9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm36967-201ENSMUST00000193814 266 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Prob1-201ENSMUST00000097619 3021 ntBASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col13a1Q9R1N9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms