Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.83□□□□□ -0.03
Cdh17Q9R100 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh17Q9R100 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.82□□□□□ -0.04
Cdh17Q9R100 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdh17Q9R100 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.82□□□□□ -0.04
Cdh17Q9R100 Gm6296-201ENSMUST00000222599 943 ntBASIC14.82□□□□□ -0.04
Cdh17Q9R100 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.82□□□□□ -0.04
Cdh17Q9R100 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh17Q9R100 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm11780-201ENSMUST00000136880 516 ntBASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.81□□□□□ -0.04
Cdh17Q9R100 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.81□□□□□ -0.04
Cdh17Q9R100 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh17Q9R100 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.8□□□□□ -0.04
Cdh17Q9R100 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Gm18669-201ENSMUST00000216049 778 ntBASIC14.8□□□□□ -0.04
Cdh17Q9R100 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdh17Q9R100 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh17Q9R100 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms