Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Gm11779-201ENSMUST00000118541 368 ntBASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcf1Q9QZM3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcf1Q9QZM3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcf1Q9QZM3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms