Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Gm6415-201ENSMUST00000118488 348 ntBASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.9■□□□□ 0.46
Zcchc17Q9ESX4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Zcchc17Q9ESX4 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Gm11543-201ENSMUST00000120758 370 ntBASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc17Q9ESX4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm13823-201ENSMUST00000119930 345 ntBASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm25144-201ENSMUST00000179561 110 ntBASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm25352-201ENSMUST00000179815 110 ntBASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc17Q9ESX4 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Gm27989-201ENSMUST00000184721 107 ntBASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc17Q9ESX4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Zcchc17Q9ESX4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms