Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Mir6420-201ENSMUST00000185032 102 ntBASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Gm6007-201ENSMUST00000208170 823 ntBASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Gm15824-201ENSMUST00000119516 955 ntBASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Gm20445-201ENSMUST00000061905 565 ntBASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-4Q9EQM3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Nkx2-4Q9EQM3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Mir1897-201ENSMUST00000122581 272 ntBASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm42612-201ENSMUST00000197986 623 ntBASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm43170-201ENSMUST00000199827 612 ntBASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Nkx2-4Q9EQM3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx2-4Q9EQM3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms