Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ap3s1Q9DCR2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Trmt13-210ENSMUST00000198454 880 ntBASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ap3s1Q9DCR2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Odf3b-204ENSMUST00000227834 930 ntBASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ap3s1Q9DCR2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gm5643-201ENSMUST00000117081 966 ntBASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gm10698-201ENSMUST00000182663 604 ntBASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Gm10602-201ENSMUST00000098239 609 ntBASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ap3s1Q9DCR2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms