Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf225Q9D7D1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf225Q9D7D1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf225Q9D7D1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf225Q9D7D1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf225Q9D7D1 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Gm10499-201ENSMUST00000174094 934 ntBASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf225Q9D7D1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gm18944-201ENSMUST00000207672 643 ntBASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 AC134439.1-201ENSMUST00000220923 600 ntBASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf225Q9D7D1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Celf4-206ENSMUST00000224553 1729 ntBASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms