Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm40466-201ENSMUST00000212174 422 ntBASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm12384-201ENSMUST00000119228 919 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm29310-201ENSMUST00000185468 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21825-201ENSMUST00000185728 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm29109-201ENSMUST00000185895 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21896-201ENSMUST00000186520 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21873-201ENSMUST00000186728 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21794-201ENSMUST00000187056 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21880-201ENSMUST00000187275 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21826-201ENSMUST00000187451 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21198-201ENSMUST00000188393 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21749-201ENSMUST00000189343 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21901-201ENSMUST00000189568 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm29424-201ENSMUST00000189716 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm28599-201ENSMUST00000189838 694 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21867-201ENSMUST00000189917 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm29269-201ENSMUST00000190087 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21722-201ENSMUST00000190153 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm28423-201ENSMUST00000190701 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21899-201ENSMUST00000190745 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21910-201ENSMUST00000191163 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21849-201ENSMUST00000191571 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm28678-201ENSMUST00000191593 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm20910-201ENSMUST00000193268 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Gm21871-201ENSMUST00000194621 696 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd1Q9D0E3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Gm45930-201ENSMUST00000221330 292 ntBASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd1Q9D0E3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.08■□□□□ 0.17
Lysmd1Q9D0E3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Lysmd1Q9D0E3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Lysmd1Q9D0E3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd1Q9D0E3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms