Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb1Q9CQ70 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb1Q9CQ70 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Gm18669-201ENSMUST00000216049 778 ntBASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb1Q9CQ70 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb1Q9CQ70 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms