Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rnf111Q99ML9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm7506-201ENSMUST00000207758 815 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.76□□□□□ -0.05
Rnf111Q99ML9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf111Q99ML9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms