Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-1Q99MA9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-1Q99MA9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Gm9794-201ENSMUST00000202370 423 ntBASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx6-1Q99MA9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-1Q99MA9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-1Q99MA9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-1Q99MA9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-1Q99MA9 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.21□□□□□ -0.14
Nkx6-1Q99MA9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms