Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm15358-201ENSMUST00000119249 520 ntBASIC13.32□□□□□ -0.28
Scrt1Q99M85 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.32□□□□□ -0.28
Scrt1Q99M85 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scrt1Q99M85 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm8344-201ENSMUST00000119813 856 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Mir6990-201ENSMUST00000183724 91 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm45612-201ENSMUST00000211320 160 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.31□□□□□ -0.28
Scrt1Q99M85 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.31□□□□□ -0.28
Scrt1Q99M85 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms