Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Gm8097-201ENSMUST00000117903 829 ntBASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Gm8655-201ENSMUST00000221159 852 ntBASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Birc2-201ENSMUST00000054878 378 ntBASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Chmp1b1Q99LU0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chmp1b1Q99LU0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Gm28659-201ENSMUST00000188013 759 ntBASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp1b1Q99LU0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp1b1Q99LU0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Gm19164-201ENSMUST00000210667 640 ntBASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms