Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Gm5566-201ENSMUST00000116118 459 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.68■□□□□ 0.58
RtcbQ99LF4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Shd-206ENSMUST00000225145 998 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.68■□□□□ 0.58
RtcbQ99LF4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.68■□□□□ 0.58
RtcbQ99LF4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RtcbQ99LF4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.67■□□□□ 0.58
RtcbQ99LF4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Gm29667-201ENSMUST00000190817 490 ntBASIC18.67■□□□□ 0.58
RtcbQ99LF4 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.67■□□□□ 0.58
RtcbQ99LF4 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.67■□□□□ 0.58
RtcbQ99LF4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RtcbQ99LF4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.66■□□□□ 0.58
RtcbQ99LF4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RtcbQ99LF4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.65■□□□□ 0.58
RtcbQ99LF4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Asic1-205ENSMUST00000228185 1818 ntBASIC18.65■□□□□ 0.58
RtcbQ99LF4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RtcbQ99LF4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RtcbQ99LF4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RtcbQ99LF4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.64■□□□□ 0.57
RtcbQ99LF4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms