Protein–RNA interactions for Protein: Q91YK2

Rrp1b, Ribosomal RNA processing protein 1 homolog B, mousemouse

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1bQ91YK2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp1bQ91YK2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp1bQ91YK2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp1bQ91YK2 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Gm15565-201ENSMUST00000118890 427 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Rrp1bQ91YK2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms