Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Gm14005-208ENSMUST00000223654 681 ntBASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Gm25131-201ENSMUST00000082653 151 ntBASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb17Q91VD8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Gm25653-201ENSMUST00000158473 138 ntBASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 CT025525.1-201ENSMUST00000226325 1054 ntBASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb17Q91VD8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 AC132433.1-201ENSMUST00000221553 1101 ntBASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb17Q91VD8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 AW822252-206ENSMUST00000208904 237 ntBASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb17Q91VD8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms