Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm14042-201ENSMUST00000120139 833 ntBASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lmcd1Q8VEE1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lmcd1Q8VEE1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lmcd1Q8VEE1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lmcd1Q8VEE1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Gm22189-201ENSMUST00000103822 86 ntBASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Gm24543-201ENSMUST00000103867 82 ntBASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Gm5566-201ENSMUST00000116118 459 ntBASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Gm20445-201ENSMUST00000061905 565 ntBASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lmcd1Q8VEE1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lmcd1Q8VEE1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.12■□□□□ 0.17
Lmcd1Q8VEE1 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms