Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 AV026068-213ENSMUST00000223675 1171 ntBASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Celf4-206ENSMUST00000224553 1729 ntBASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.19■□□□□ 0.5
Top1mtQ8R4U6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Top1mtQ8R4U6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Gm45167-201ENSMUST00000208007 322 ntBASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Top1mtQ8R4U6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Gm7787-201ENSMUST00000216858 688 ntBASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Top1mtQ8R4U6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Top1mtQ8R4U6 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms