Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmc1Q8R4P5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmc1Q8R4P5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gm43347-201ENSMUST00000200226 580 ntBASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmc1Q8R4P5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tmc1Q8R4P5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Gm15372-201ENSMUST00000120729 834 ntBASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tmc1Q8R4P5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmc1Q8R4P5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tmc1Q8R4P5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms