Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Gm27300-201ENSMUST00000184085 97 ntBASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Gm27335-201ENSMUST00000184758 97 ntBASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn1Q8K0T0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn1Q8K0T0 Celf4-206ENSMUST00000224553 1729 ntBASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn1Q8K0T0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rtn1Q8K0T0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn1Q8K0T0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.52■□□□□ 0.39
Rtn1Q8K0T0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn1Q8K0T0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.51■□□□□ 0.39
Rtn1Q8K0T0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms