Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trpm6Q8CIR4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trpm6Q8CIR4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trpm6Q8CIR4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trpm6Q8CIR4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trpm6Q8CIR4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Gm12428-201ENSMUST00000119844 727 ntBASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Gm24158-201ENSMUST00000175263 71 ntBASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm6Q8CIR4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.21■□□□□ 0.02
Trpm6Q8CIR4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Gm27618-201ENSMUST00000183671 60 ntBASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm6Q8CIR4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm6Q8CIR4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.18■□□□□ 0.02
Trpm6Q8CIR4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms