Protein–RNA interactions for Protein: Q8CEQ0

Cdkl1, Cyclin-dependent kinase-like 1, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl1Q8CEQ0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Gm7230-201ENSMUST00000173026 815 ntBASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.44□□□□□ -0.1
Cdkl1Q8CEQ0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gm24589-201ENSMUST00000116692 94 ntBASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl1Q8CEQ0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Sybu-209ENSMUST00000228639 4113 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl1Q8CEQ0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl1Q8CEQ0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms