Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim52Q8CDV4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm27306-201ENSMUST00000183970 107 ntBASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm18766-201ENSMUST00000189811 808 ntBASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim52Q8CDV4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Prob1-201ENSMUST00000097619 3021 ntBASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gm28630-201ENSMUST00000187806 498 ntBASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim52Q8CDV4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim52Q8CDV4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim52Q8CDV4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim52Q8CDV4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.65■□□□□ 0.58
Trim52Q8CDV4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms