Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc38Q8CDN8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc38Q8CDN8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc38Q8CDN8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Ccdc38Q8CDN8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc38Q8CDN8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc38Q8CDN8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.89■□□□□ 0.3
Ccdc38Q8CDN8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc38Q8CDN8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.88■□□□□ 0.29
Ccdc38Q8CDN8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms