Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.69■□□□□ 0.42
Vps53Q8CCB4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps53Q8CCB4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps53Q8CCB4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps53Q8CCB4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps53Q8CCB4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms