Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm6623-201ENSMUST00000173570 544 ntBASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm19164-201ENSMUST00000210667 640 ntBASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lysmd4Q8CC84 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lysmd4Q8CC84 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm9172-201ENSMUST00000212092 954 ntBASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lysmd4Q8CC84 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Carlr-201ENSMUST00000181515 2574 ntBASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Gm12008-201ENSMUST00000117791 755 ntBASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lysmd4Q8CC84 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms